This eliminates the types of syntax errors seen with the unexpected '('s in the Cygwin path variable. I simply inserted the two conditionals Li Peng suggested after the last 'else if' statement before the final 'else' statement. The function in ATLAS/CONFIG/src/atlconf_misc.c (where ATLAS is your source directory) to edit is called *GetPathEnvVar, which in my ATLAS 3.10.1 file starts at line 687. The tricky part here is in the lack of some detail. Issue 1) was figured out/solved by someone a while back here is the link: The main caveats I found in successfully installing ATLAS were:ġ) Editing some ATLAS configure C code to handle parentheses in Cygwin PATH variable.Ģ) Including direct paths to Cygwin's gcc and gfortran in the configure commandģ) Including the path to Windows 64 bit architectural defaults in the configure command It was not as straightforward as my install was for ATLAS 3.8.4 on the Windows 7 system, but as of today, it successfully installed and checked out with no failures. I decided to install the most up to date stable version 3.10.1. I had previously installed ATLAS 3.8.4 on a Windows 7 system in Cygwin, and I recently had to install ATLAS on a Windows 8.1 system. This post is mainly for other Cygwin users that get frustrated or find themselves on this page in the process of installing ATLAS libraries.
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